Ellison, C.M.; Cronin, M.T.D.; Madden, J.C.; Schultz, T.W. Definition of the structural domain of the baseline non-polar narcosis model for Tetrahymena pyriformis. SAR QSAR Environ. Res. 2008, 19, 7-8, 751–783.

QsarDB Repository

Ellison, C.M.; Cronin, M.T.D.; Madden, J.C.; Schultz, T.W. Definition of the structural domain of the baseline non-polar narcosis model for Tetrahymena pyriformis. SAR QSAR Environ. Res. 2008, 19, 7-8, 751–783.

QDB archive DOI: 10.15152/QDB.76   DOWNLOAD

QsarDB content

Property pIGC50: 40-h Tetrahymena toxicity as log(1/IGC50) [log(L/mmol)]

Eq1: Saturated alcohols and ketones i

Regression model (regression)

Open in:QDB ExplorerQDB Predictor

NameTypen

R2

σ

Training settraining470.9570.213
Eq2: Saturated alcohols and ketones i

Regression model (regression)

Open in:QDB ExplorerQDB Predictor

NameTypen

R2

σ

Training settraining870.9620.253
Test setexternal validation4230.8400.398
QMRF: Saturated alcohols and ketones i

Regression model (regression)   QMRF

Open in:QDB ExplorerQDB Predictor

NameTypen

R2

σ

Training settraining870.9570.269

Citing

When using this QDB archive, please cite (see details) it together with the original article:

  • Ruusmann, V.; Piir, G. Data for: Definition of the structural domain of the baseline non-polar narcosis model for Tetrahymena pyriformis. QsarDB repository, QDB.76. 2012. https://doi.org/10.15152/QDB.76

  • Ellison, C. M.; Cronin, M. T. D.; Madden, J. C.; Schultz, T. W. Definition of the structural domain of the baseline non-polar narcosis model for Tetrahymena pyriformis. SAR QSAR Environ. Res. 2008, 19, 751–783. https://doi.org/10.1080/10629360802550366

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dc.date.accessioned2012-05-23T16:08:41Z
dc.date.available2012-05-23T16:08:41Z
dc.date.issued2012-05-23
dc.identifier.urihttp://hdl.handle.net/10967/76
dc.identifier.urihttp://dx.doi.org/10.15152/QDB.76
dc.description.abstractThe aim of this work was to develop a high-quality 1-octanol/water partition coefficient-dependent (log P) baseline quantitative structure-activity relationship (QSAR) for the toxicity (log IGC(50)(-1)) of classic non-polar narcotics to Tetrahymena pyriformis, and subsequently use this model to define the domain of applicability for baseline narcosis. The toxicities to T. pyriformis of 514 possible non-polar narcotics were assessed. A QSAR to predict toxicity was created from a training set of 87 classic non-polar narcotics (the saturated alcohols and ketones): log IGC(50)(-1) = 0.78 log P-2.01 (n = 87, r(2) = 0.96). This model was then used to predict the toxicity of the remaining chemicals. The chemicals from the large dataset which were poorly predicted by the model (i.e. the prediction was > +/-0.5 log units from the experimental value) were used to aid the definition of structural categories of chemicals which are not non-polar narcotics. Doing so has enabled the domain for non-polar narcosis to be defined in terms of structural categories. Defining domains of applicability for QSAR models is important if they are to be considered for making predictions of toxicity for regulatory purposes.
dc.publisherVillu Ruusmann
dc.publisherGeven Piir
dc.rightsAttribution 4.0 International
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/
dc.titleEllison, C.M.; Cronin, M.T.D.; Madden, J.C.; Schultz, T.W. Definition of the structural domain of the baseline non-polar narcosis model for Tetrahymena pyriformis. SAR QSAR Environ. Res. 2008, 19, 7-8, 751–783.
qdb.property.endpoint6. Other (Acute toxicity to ciliate protozoa)
qdb.property.speciesTetrahymena pyriformis
qdb.descriptor.applicationKOWWIN
bibtex.entryarticle
bibtex.entry.authorEllison, C. M.
bibtex.entry.authorCronin, M. T. D.
bibtex.entry.authorMadden, J. C.
bibtex.entry.authorSchultz, T. W.
bibtex.entry.doi10.1080/10629360802550366
bibtex.entry.journalSAR QSAR Environ. Res.
bibtex.entry.number7-8
bibtex.entry.pages751–783
bibtex.entry.titleDefinition of the structural domain of the baseline non-polar narcosis model for Tetrahymena pyriformis
bibtex.entry.volume19
bibtex.entry.year2008
qdb.model.typeRegression model (regression)
qdb.model.qmrfQMRF=Q13-33-0075


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